computer science

• Free JAVA tool for visualisation of large genomes
  Results are presented in Makula M and Benuskova L (2009) Interactive visualisation of oligomer frequency in DNA. Computing and Informatics , 28: 695-710. reprint
• C++ programme code for the granule cell
  used for the publication Benuskova L and Abraham WC (2007) STDP rule endowed with the BCM sliding threshold accounts for hippocampal heterosynaptic plasticity. Journal of Computational Neuroscience 22(2): 129-133. link
• Brain-Gene Ontology (Description and download here)
  Results are presented for instance in
  -- Kasabov N, Jain V, Benuskova L (2008) Integrating evolving brain-gene ontology and connectionist-based system for modeling and knowledge discovery. Neural Networks 21(2-3): 266-275. link
• Simulator for computational neurogenetic modelling of local field potentials
  Go to KEDRI's Computational Intelligence Repository, then in the menu click on Computational Neuro-Genetic Modelling.
  Results are presented in
  -- Benuskova L, Kasabov N (2008) Modeling brain dynamics using computational neurogenetic approach. Cognitive Neurodynamics 2(4): 319-334. link
  -- Benuskova L, Jain V, Wysoski SG and Kasabov N (2006) Computational neurogenetic modeling: a pathway to new discoveries in genetic neuroscience. Intl. Journal of Neural Systems, 16(3): 215-227. link

This page is maintained by Lubica Benuskova : lubica@cs.otago.ac.nz